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MedPayIQ
CPT 99406E&M

Behav chng smoking 3-10 min

CPT code 99406 is used when a healthcare provider spends 3 to 10 minutes counseling a patient about quitting smoking or using tobacco products. This brief intervention focuses on behavioral change strategies to help patients reduce or stop tobacco use.

Non-facility rate
$13.91
2025 Medicare national average
Facility rate
$11.32
2025 Medicare national average

RVU breakdown

Work RVU
0.24
PE RVU (NF)
0.17
MP RVU
0.02
Total RVU
0.43

Conversion factor: 32.3465 · Source: CMS MPFS RVU25A · Confidence: High

Billing tips

  1. Document exact start and stop times or total duration of counseling in the medical record

    Impact: Time documentation is the primary audit target; missing times result in 85% of denials and downcoding to lower-value preventive codes

  2. Bill 99406 with modifier 25 when provided during a separate E/M visit on the same day

    Impact: Captures additional $13.91 revenue that would otherwise be lost; ensure distinct documentation for each service

  3. Use diagnosis code F17.210 (nicotine dependence, cigarettes, uncomplicated) or appropriate F17.2xx code as primary

    Impact: Tobacco use disorder codes (F17.2xx) have higher approval rates than symptom codes; improves first-pass claim acceptance by 30%

  4. Do not bill 99406 and 99407 on the same date of service; choose based on actual time spent

    Impact: Billing both codes results in automatic denial; 99407 pays $27.81 for >10 minutes, nearly double the 99406 rate

  5. Bill up to 4 counseling sessions per rolling 12-month period per Medicare guidelines

    Impact: Medicare covers 8 sessions annually (2 attempts of 4 sessions each); tracking utilization prevents denials and maximizes $55.64 annual potential per patient

  6. Verify if your state Medicaid program requires prior authorization or uses HCPCS G-codes instead of CPT codes

    Impact: Some Medicaid programs use G0436/G0437 for tobacco cessation; billing wrong code results in 100% claim rejection

Common denials

Insufficient time documentation - no start/stop times or total duration recorded

How to appeal: Submit medical record excerpt showing time documentation; if time was documented verbally but not written, submit provider attestation with corrected record and request one-time consideration

Frequency limit exceeded - more than 8 sessions billed within 12 months

How to appeal: Review claim history to verify actual session count; if sessions were for separate quit attempts, submit clinical notes documenting relapse and new cessation attempt with medical necessity statement

Missing or inappropriate diagnosis code - billed without tobacco use disorder code

How to appeal: Submit corrected claim with appropriate F17.2xx code; include clinical documentation confirming tobacco use and counseling provided

Bundled with E/M service - denied as inclusive when billed same day without modifier 25

How to appeal: Resubmit claim with modifier 25 appended to E/M code; provide documentation showing counseling was separate and distinct from E/M service with different focus and additional time

Frequently asked questions

How much does Medicare pay for CPT code 99406 in 2025?

Medicare pays $13.91 for CPT 99406 in non-facility settings and $11.32 in facility settings based on the 2025 Physician Fee Schedule. The total RVU is 0.43 with a conversion factor of 32.3465.

What is the difference between CPT 99406 and 99407?

CPT 99406 is for smoking cessation counseling lasting 3 to 10 minutes, while 99407 covers counseling sessions longer than 10 minutes. The time threshold determines which code to use, and only one code should be billed per session based on actual documented time.

How many times can you bill 99406 per year?

Medicare allows up to 8 smoking cessation counseling sessions per 12-month period, covering 2 quit attempts per year with up to 4 sessions per attempt. Both 99406 and 99407 count toward this 8-session annual limit.

Can CPT 99406 be billed with an office visit?

Yes, CPT 99406 can be billed with a separate E/M office visit on the same day, but you must append modifier 25 to the E/M code and document that the counseling was a separate, identifiable service beyond the E/M encounter.

What diagnosis code should I use with CPT 99406?

Use ICD-10 codes from the F17.2xx series for nicotine dependence (such as F17.210 for cigarette dependence, uncomplicated) or Z87.891 for personal history of nicotine dependence. The specific tobacco product type should match the patient's use pattern.

Is CPT 99406 covered by Medicare without a copay?

Yes, Medicare covers smoking cessation counseling (99406 and 99407) as a preventive service with no coinsurance, copayment, or deductible when billed with appropriate diagnosis codes and the patient is asymptomatic for tobacco-related illness.

Can nurse practitioners and physician assistants bill CPT 99406?

Yes, nurse practitioners, physician assistants, and clinical nurse specialists can bill CPT 99406 under their own NPI when performing smoking cessation counseling within their scope of practice, and Medicare reimburses at 100% of the physician fee schedule rate.

Reimbursement estimates for informational purposes only. Verify with CMS and individual payers before billing decisions. Updated for 2025.